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@molgenis

MOLGENIS - open source solutions for scientific data

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  1. molgenis-emx2 molgenis-emx2 Public

    MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

    Java 26 28

  2. molgenis-service-armadillo molgenis-service-armadillo Public

    Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite

    Java 11 11

  3. systemsgenetics systemsgenetics Public

    Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

    Java 184 98

  4. vip vip Public

    Variant Interpretation Pipeline

    Shell 52 9

  5. molgenis molgenis Public

    MOLGENIS - for scientific data: management, exploration, integration and analysis.

    Java 122 96

Repositories

Showing 10 of 211 repositories
  • molgenis-emx2 Public

    MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

    molgenis/molgenis-emx2's past year of commit activity
    Java 26 LGPL-3.0 28 340 (3 issues need help) 108 Updated Oct 22, 2026
  • scMetaBrainVochteloo Public

    Code used for the Vochteloo et al scMetaBrain manuscript

    molgenis/scMetaBrainVochteloo's past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Oct 22, 2026
  • projects-erdera Public

    MOLGENIS-RD3 implementation for ERDERA

    molgenis/projects-erdera's past year of commit activity
    Python 0 0 0 5 Updated Oct 22, 2026
  • vkgl-consensus-release Public

    VKGL Consensus release pipeline

    molgenis/vkgl-consensus-release's past year of commit activity
    Python 0 GPL-3.0 0 0 1 Updated Oct 22, 2026
  • vip-annotate Public

    Variant Call Format (VCF) file annotation

    molgenis/vip-annotate's past year of commit activity
    Java 2 LGPL-3.0 0 0 0 Updated Oct 22, 2026
  • vip Public

    Variant Interpretation Pipeline

    molgenis/vip's past year of commit activity
    Shell 52 LGPL-3.0 9 2 9 Updated Oct 21, 2026
  • vip-report-template Public

    Report template for Variant Call Format (VCF) Report generator

    molgenis/vip-report-template's past year of commit activity
    TypeScript 4 LGPL-3.0 1 2 2 Updated Oct 21, 2026
  • vip-web Public

    Variant Interpretation Pipeline web interface

    molgenis/vip-web's past year of commit activity
    Java 0 LGPL-3.0 0 0 2 Updated Oct 21, 2026
  • vip-report-api Public

    Report API for Variant Call Format (VCF) Report templates

    molgenis/vip-report-api's past year of commit activity
    TypeScript 3 LGPL-3.0 0 0 0 Updated Oct 21, 2026
  • vite-plugin-inline Public

    Vite plugin that embeds .js and .css as base85 data

    molgenis/vite-plugin-inline's past year of commit activity
    TypeScript 11 LGPL-3.0 0 0 1 Updated Oct 20, 2026
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