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Original file line number Diff line number Diff line change
Expand Up @@ -17,15 +17,16 @@
# - 2.0.20140718 : Changes for LabKey 14.3: FI-Bkgd-Neg instead of FI-Bkgd-Blank
# - 3.0.20160729 : Validate that analyte bead numbers are non-null
# - 3.1.20180903 : Use transform script helper functions from Rlabkey package
# - 3.2.20260919 : GH Issue 1489: Use apikey auth (labkey.setDefaults) instead of the deprecated LabKeyTransformSessionId cookie
#
# Author: Cory Nathe, LabKey
labTransformVersion = "3.1.20180903";
labTransformVersion = "3.2.20260919";

# print the starting time for the transform script
writeLines(paste("Processing start time:",Sys.time(),"\n",sep=" "));

${rLabkeySessionId}
suppressMessages(library(Rlabkey));
labkey.setDefaults(apiKey = "${apikey}");

########################################## FUNCTIONS ##########################################

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Original file line number Diff line number Diff line change
Expand Up @@ -100,7 +100,7 @@ private void verifyScriptVersions()
assertTextPresent(TEST_ASSAY_LUM + " Runs");
DataRegionTable table = new DataRegionTable("Runs", this);
assertEquals("Unexpected Transform Script Version number", "11.0.20230206", table.getDataAsText(0, "Transform Script Version"));
assertEquals("Unexpected Lab Transform Script Version number", "3.1.20180903", table.getDataAsText(0, "Lab Transform Script Version"));
assertEquals("Unexpected Lab Transform Script Version number", "3.2.20260919", table.getDataAsText(0, "Lab Transform Script Version"));
assertNotNull(table.getDataAsText(0, "R Version"));
}

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