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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 578 190

  2. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 173 123

  3. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 155 25

  4. ensembl-rest ensembl-rest Public archive

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 149 63

  5. ensembl ensembl Public archive

    The Ensembl Core Perl API and SQL schema

    Perl 85 78

  6. ensembl-pipeline ensembl-pipeline Public archive

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 62 29

Repositories

Showing 10 of 218 repositories
  • airflow-providers-ensemblslurm Public

    Airflow operators to submit and monitor the slurm jobs

    Ensembl/airflow-providers-ensemblslurm's past year of commit activity
    Python 1 Apache-2.0 2 0 1 Updated Oct 24, 2026
  • ensembl-genes-nf Public

    Ensembl Genebuild NextFlow pipelines

    Ensembl/ensembl-genes-nf's past year of commit activity
    Nextflow 2 Apache-2.0 6 0 3 Updated Oct 24, 2026
  • VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Ensembl/VEP_plugins's past year of commit activity
    Perl 173 Apache-2.0 123 6 5 Updated Oct 23, 2026
  • Ensembl/ensembl-variation-pipelines's past year of commit activity
    Python 0 Apache-2.0 5 0 9 Updated Oct 23, 2026
  • tagene Public

    Repository hosting the TAGENE annotation pipeline

    Ensembl/tagene's past year of commit activity
    Perl 2 Apache-2.0 1 0 0 Updated Oct 23, 2026
  • ensembl-LEAP Public
    Ensembl/ensembl-LEAP's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 23, 2026
  • ensembl-LoRA Public
    Ensembl/ensembl-LoRA's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 23, 2026
  • Ensembl/ensembl-Swiper's past year of commit activity
    Python 0 0 0 0 Updated Oct 23, 2026
  • ensembl-analysis Public

    Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines

    Ensembl/ensembl-analysis's past year of commit activity
    Perl 18 Apache-2.0 36 0 1 Updated Oct 23, 2026
  • ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Ensembl/ensembl-compara's past year of commit activity
    Perl 56 Apache-2.0 68 0 2 Updated Oct 23, 2026