From a96d093a61833f39127f4a996623eeaf7c02bd01 Mon Sep 17 00:00:00 2001 From: Adam Rauch Date: Sat, 19 Sep 2026 15:05:07 -0700 Subject: [PATCH] Deprecate LabKeyTransformSessionId cookie auth --- .../resources/transformscripts/tomaras_luminex_transform.R | 5 +++-- .../org/labkey/test/tests/luminex/LuminexRTransformTest.java | 2 +- 2 files changed, 4 insertions(+), 3 deletions(-) diff --git a/luminex/resources/transformscripts/tomaras_luminex_transform.R b/luminex/resources/transformscripts/tomaras_luminex_transform.R index f06fbb2b96..8c1872bfff 100644 --- a/luminex/resources/transformscripts/tomaras_luminex_transform.R +++ b/luminex/resources/transformscripts/tomaras_luminex_transform.R @@ -17,15 +17,16 @@ # - 2.0.20140718 : Changes for LabKey 14.3: FI-Bkgd-Neg instead of FI-Bkgd-Blank # - 3.0.20160729 : Validate that analyte bead numbers are non-null # - 3.1.20180903 : Use transform script helper functions from Rlabkey package +# - 3.2.20260919 : GH Issue 1489: Use apikey auth (labkey.setDefaults) instead of the deprecated LabKeyTransformSessionId cookie # # Author: Cory Nathe, LabKey -labTransformVersion = "3.1.20180903"; +labTransformVersion = "3.2.20260919"; # print the starting time for the transform script writeLines(paste("Processing start time:",Sys.time(),"\n",sep=" ")); -${rLabkeySessionId} suppressMessages(library(Rlabkey)); +labkey.setDefaults(apiKey = "${apikey}"); ########################################## FUNCTIONS ########################################## diff --git a/luminex/test/src/org/labkey/test/tests/luminex/LuminexRTransformTest.java b/luminex/test/src/org/labkey/test/tests/luminex/LuminexRTransformTest.java index 3fc7a25d62..81597c37d6 100644 --- a/luminex/test/src/org/labkey/test/tests/luminex/LuminexRTransformTest.java +++ b/luminex/test/src/org/labkey/test/tests/luminex/LuminexRTransformTest.java @@ -100,7 +100,7 @@ private void verifyScriptVersions() assertTextPresent(TEST_ASSAY_LUM + " Runs"); DataRegionTable table = new DataRegionTable("Runs", this); assertEquals("Unexpected Transform Script Version number", "11.0.20230206", table.getDataAsText(0, "Transform Script Version")); - assertEquals("Unexpected Lab Transform Script Version number", "3.1.20180903", table.getDataAsText(0, "Lab Transform Script Version")); + assertEquals("Unexpected Lab Transform Script Version number", "3.2.20260919", table.getDataAsText(0, "Lab Transform Script Version")); assertNotNull(table.getDataAsText(0, "R Version")); }