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3948 lines (3748 loc) · 174 KB
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//---------------------------------------------------------------------------
// TestFuncResponseSeedPredation.cpp
//---------------------------------------------------------------------------
#include "TestFuncResponseSeedPredation.h"
#include <gtest/gtest.h>
#include "SimManager.h"
#include "Grid.h"
#include "FuncResponseSeedPredation.h"
#include <fstream>
#include <math.h>
/////////////////////////////////////////////////////////////////////////////
// TestDensities()
// This verifies that densities are correctly written each timestep. If the
// predator densities are to be preserved, the values in the predator grid
// will be different after a second timestep; if they are not, it will be
// the same (assuming the seed grid input is the same).
// WriteFunResponseSeedPredationXMLFile6() will create the file with two
// timesteps where the densities are to be preserved;
// WriteFunResponseSeedPredationXMLFile7() is the same but densities are not to
// be preserved.
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestDensities) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
clGrid *p_oPredatorGrid, *p_oSeedsGrid;
float fPredNum1, //number of predators after timestep 1
fPredNum2, //number of predators after timestep 2
fNumSeeds = 51200000.0;
//Read in the file with preservation of predator densities
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLFile6());
p_oPredatorGrid = p_oSimManager->GetGridObject("Seed Predators");
p_oSeedsGrid = p_oSimManager->GetGridObject("Dispersed Seeds");
//Set the seeds
p_oSeedsGrid->SetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), fNumSeeds);
//Run one timestep
p_oSimManager->RunSim(1);
//Get the number of predators
p_oPredatorGrid->GetValueOfCell(0, 0, p_oPredatorGrid->GetFloatDataCode("num preds"), &fPredNum1);
//Reset the seeds
p_oSeedsGrid->SetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), fNumSeeds);
//Run one timestep
p_oSimManager->RunSim(1);
//Get the number of predators
p_oPredatorGrid->GetValueOfCell(0, 0, p_oPredatorGrid->GetFloatDataCode("num preds"), &fPredNum2);
//Assert that they are at least 20% different
EXPECT_GT(fabs(fPredNum1 - fPredNum2)/fPredNum1, 0.2);
//Now repeat with no preservation of predator densities
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLFile7());
p_oSeedsGrid = p_oSimManager->GetGridObject("Dispersed Seeds");
p_oPredatorGrid = p_oSimManager->GetGridObject("Seed Predators");
//Set the seeds
p_oSeedsGrid->SetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), fNumSeeds);
//Run one timestep
p_oSimManager->RunSim(1);
//Get the number of predators
p_oPredatorGrid->GetValueOfCell(0, 0, p_oPredatorGrid->GetFloatDataCode("num preds"), &fPredNum1);
//Reset the seeds
p_oSeedsGrid->SetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), fNumSeeds);
//Run one timestep
p_oSimManager->RunSim(1);
//Get the number of predators
p_oPredatorGrid->GetValueOfCell(0, 0, p_oPredatorGrid->GetFloatDataCode("num preds"), &fPredNum2);
//Assert that they are within 1%
EXPECT_LT(fabs(fPredNum1 - fPredNum2)/fPredNum1, 0.01);
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestSeedOfftake1()
// This verifies that the correct number of seeds is left in the seed grid
// after the model runs. This is based on Wendy's spreadsheet - how many
// should be left if you subtract all the offtake from the original number.
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSeedOfftake1) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
clGrid *p_oSeedsGrid;
float fNumExpectedSeeds = 46724929.24,
fSeed1Proportion = 0.25, fSeed2Proportion = 0.75,
fNumActualSeeds,
fSpecies1Seeds,
fSpecies2Seeds,
fSpecies3Seeds;
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLFile8());
p_oSimManager->RunSim(1);
p_oSeedsGrid = p_oSimManager->GetGridObject("Dispersed Seeds");
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), &fSpecies1Seeds);
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_1"), &fSpecies2Seeds);
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_2"), &fSpecies3Seeds);
//Make sure the total is right - only species 1 and 2
fNumActualSeeds = fSpecies1Seeds + fSpecies2Seeds;
EXPECT_LT(fabs(fNumExpectedSeeds - fNumActualSeeds)/fNumActualSeeds, 0.01);
//Make sure that the species 3 level is right
EXPECT_LT(fabs(100000 - fSpecies3Seeds), 1);
//Make sure the proportions of species 1 and species 2 are right
EXPECT_LT(fabs((fNumExpectedSeeds * fSeed1Proportion) - fSpecies1Seeds)/fSpecies1Seeds, 0.01);
EXPECT_LT(fabs((fNumExpectedSeeds * fSeed2Proportion) - fSpecies2Seeds)/fSpecies2Seeds, 0.01);
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestSeedOfftake2()
// This tests the combination of regular and linked seed predation. This will
// use WriteFunResponseSeedPredationXMLOfftakeFile2().
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSeedOfftake2) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
clGrid *p_oSeedsGrid;
clBehaviorBase *p_oTemp;
clFuncResponseSeedPredation *p_oPred;
float fNumSp1ExpectedSeeds = 47623086.43,
fNumSp2ExpectedSeeds = 51200000,
fNumSp3ExpectedSeeds = 36000000,
fExpectedOfftake = 0.077311856,
fSpecies1Seeds,
fSpecies2Seeds,
fSpecies3Seeds,
fOfftake;
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLOfftakeTestFile2());
p_oSimManager->RunSim(1);
//Test seed totals
p_oSeedsGrid = p_oSimManager->GetGridObject("Dispersed Seeds");
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), &fSpecies1Seeds);
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_1"), &fSpecies2Seeds);
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_2"), &fSpecies3Seeds);
EXPECT_LT(fabs(fNumSp1ExpectedSeeds - fSpecies1Seeds), 100);
EXPECT_LT(fabs(fNumSp2ExpectedSeeds - fSpecies2Seeds), 2);
EXPECT_LT(fabs(fNumSp3ExpectedSeeds - fSpecies3Seeds), 2);
//Test seed offtake rate
p_oTemp = p_oSimManager->GetBehaviorObject("LinkedFunctionalResponseSeedPredation");
ASSERT_TRUE(NULL != p_oTemp);
p_oPred = dynamic_cast<clFuncResponseSeedPredation*>(p_oTemp);
fOfftake = p_oPred->GetOfftakeRate();
EXPECT_LT(fabs(fExpectedOfftake - fOfftake)/fExpectedOfftake, 0.001);
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestSeedOfftake3()
// This tests seed pooling across cells and species for linked seed predation.
// This will use WriteFunResponseSeedPredationXMLOfftakeFile3().
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSeedOfftake3) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
clGrid *p_oSeedsGrid;
clBehaviorBase *p_oTemp;
clFuncResponseSeedPredation *p_oPred;
float fNumSp1ExpectedSeeds = 0,
fNumSp2ExpectedSeeds = 100000,
fNumSp3ExpectedSeeds = 100000,
fExpectedOfftake = 0.596678234,
fSpecies1Seeds,
fSpecies2Seeds,
fSpecies3Seeds,
fOfftake;
int iX, iY, iNumXCells, iNumYCells;
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLOfftakeTestFile3());
p_oSimManager->RunSim(1);
//Test seed totals
p_oSeedsGrid = p_oSimManager->GetGridObject("Dispersed Seeds");
iNumXCells = p_oSeedsGrid->GetNumberXCells();
iNumYCells = p_oSeedsGrid->GetNumberYCells();
EXPECT_EQ(iNumXCells, 16);
EXPECT_EQ(iNumYCells, 16);
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
p_oSeedsGrid->GetValueOfCell(iX, iY, p_oSeedsGrid->GetFloatDataCode("seeds_0"), &fSpecies1Seeds);
p_oSeedsGrid->GetValueOfCell(iX, iY, p_oSeedsGrid->GetFloatDataCode("seeds_1"), &fSpecies2Seeds);
p_oSeedsGrid->GetValueOfCell(iX, iY, p_oSeedsGrid->GetFloatDataCode("seeds_2"), &fSpecies3Seeds);
EXPECT_EQ(fNumSp1ExpectedSeeds, fSpecies1Seeds);
EXPECT_EQ(fNumSp2ExpectedSeeds, fSpecies2Seeds);
EXPECT_EQ(fNumSp3ExpectedSeeds, fSpecies3Seeds);
}
}
//Test seed offtake rate
p_oTemp = p_oSimManager->GetBehaviorObject("LinkedFunctionalResponseSeedPredation");
ASSERT_TRUE(NULL != p_oTemp);
p_oPred = dynamic_cast<clFuncResponseSeedPredation*>(p_oTemp);
fOfftake = p_oPred->GetOfftakeRate();
EXPECT_LT(fabs(fExpectedOfftake - fOfftake)/fExpectedOfftake, 0.01);
//Eliminate all seeds, run another timestep, and verify an updated offtake
//rate
fSpecies1Seeds = 0;
for (iX = 0; iX < iNumXCells; iX++) {
for (iY = 0; iY < iNumYCells; iY++) {
p_oSeedsGrid->SetValueOfCell(iX, iY, p_oSeedsGrid->GetFloatDataCode("seeds_0"), fSpecies1Seeds);
p_oSeedsGrid->SetValueOfCell(iX, iY, p_oSeedsGrid->GetFloatDataCode("seeds_1"), fSpecies1Seeds);
p_oSeedsGrid->SetValueOfCell(iX, iY, p_oSeedsGrid->GetFloatDataCode("seeds_2"), fSpecies1Seeds);
}
}
p_oSimManager->RunSim(1);
fOfftake = p_oPred->GetOfftakeRate();
EXPECT_LT(fOfftake >= 0 && fOfftake, 0.00001);
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestSeedOfftake4()
// This tests species- and season-specific parameters. This will use
// WriteFunResponseSeedPredationXMLOfftakeFile4().
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSeedOfftake4) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
clGrid *p_oSeedsGrid;
float fNumSp1ExpectedSeeds = 24901578.21,
fNumSp2ExpectedSeeds = 33799935.73,
fNumSp3ExpectedSeeds = 36000000,
fNumSp4ExpectedSeeds = 36778314.44,
fSpecies1Seeds,
fSpecies2Seeds,
fSpecies3Seeds,
fSpecies4Seeds;
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLOfftakeTestFile4());
p_oSimManager->RunSim(1);
//Test seed totals
p_oSeedsGrid = p_oSimManager->GetGridObject("Dispersed Seeds");
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), &fSpecies1Seeds);
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_1"), &fSpecies2Seeds);
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_2"), &fSpecies3Seeds);
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_3"), &fSpecies4Seeds);
EXPECT_LT(fabs(fNumSp1ExpectedSeeds - fSpecies1Seeds)/fNumSp1ExpectedSeeds, 0.001);
EXPECT_LT(fabs(fNumSp2ExpectedSeeds - fSpecies2Seeds)/fNumSp2ExpectedSeeds, 0.001);
EXPECT_LT(fabs(fNumSp3ExpectedSeeds - fSpecies3Seeds), 2);
EXPECT_LT(fabs(fNumSp4ExpectedSeeds - fSpecies4Seeds)/fNumSp4ExpectedSeeds, 0.001);
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestSetup1()
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSetup1) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLFile2());
clGrid *p_oPredatorGrid = p_oSimManager->GetGridObject("Seed Predators");
//Make sure it has default resolution
EXPECT_LT(fabs(8 - p_oPredatorGrid->GetLengthXCells()), 0.001);
EXPECT_LT(fabs(8 - p_oPredatorGrid->GetLengthYCells()), 0.001);
//Make sure the grid cells have the right value - should all be 30
float fExpected = 30, fActual;
int iNumX = p_oPredatorGrid->GetNumberXCells(),
iNumY = p_oPredatorGrid->GetNumberYCells(),
iNumCode = p_oPredatorGrid->GetFloatDataCode("num preds"),
iX, iY;
for (iX = 0; iX < iNumX; iX++) {
for (iY = 0; iY < iNumY; iY++) {
p_oPredatorGrid->GetValueOfCell(iX, iY, iNumCode, &fActual);
EXPECT_LT(fabs(fActual - fExpected), 0.001);
}
}
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestSetup2()
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSetup2) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLFile3());
clGrid *p_oPredatorGrid = p_oSimManager->GetGridObject("Seed Predators");
//Make sure it has default resolution
EXPECT_LT(fabs(8 - p_oPredatorGrid->GetLengthXCells()), 0.001);
EXPECT_LT(fabs(8 - p_oPredatorGrid->GetLengthYCells()), 0.001);
//Make sure the grid cells have the right value - should all be 30
float fExpected = 0, fActual;
int iNumX = p_oPredatorGrid->GetNumberXCells(),
iNumY = p_oPredatorGrid->GetNumberYCells(),
iNumCode = p_oPredatorGrid->GetFloatDataCode("num preds"),
iX, iY;
for (iX = 0; iX < iNumX; iX++) {
for (iY = 0; iY < iNumY; iY++) {
p_oPredatorGrid->GetValueOfCell(iX, iY, iNumCode, &fActual);
EXPECT_LT(fabs(fActual - fExpected), 0.001);
}
}
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestSetup3()
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSetup3) {
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLFile4());
clGrid *p_oPredatorGrid = p_oSimManager->GetGridObject("Seed Predators");
//Make sure it has default resolution
EXPECT_LT(fabs(2 - p_oPredatorGrid->GetLengthXCells()), 0.001);
EXPECT_LT(fabs(4 - p_oPredatorGrid->GetLengthYCells()), 0.001);
//Make sure the grid cells have the right value - should all be 30
float fExpected, fActual;
int iNumX = p_oPredatorGrid->GetNumberXCells(),
iNumY = p_oPredatorGrid->GetNumberYCells(),
iNumCode = p_oPredatorGrid->GetFloatDataCode("num preds"),
iX, iY;
for (iX = 0; iX < iNumX; iX++) {
for (iY = 0; iY < iNumY; iY++) {
fExpected = iX + iY;
p_oPredatorGrid->GetValueOfCell(iX, iY, iNumCode, &fActual);
EXPECT_LT(fabs(fActual - fExpected), 0.001);
}
}
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// TestErrorProcessing()
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestErrorProcessing)
{
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile1());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile1.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetParameterFileData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile1.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile2());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile2.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile2.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile3());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile3.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile3.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile4());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile4.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetParameterFileData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile4.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile5());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile5.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetParameterFileData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile5.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile6());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile6.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile6.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile7());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile7.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile7.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile8());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile8.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetParameterFileData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile8.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile9());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile9.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetParameterFileData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile9.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile10());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile10.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetParameterFileData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile10.";
}
;
}
try
{
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLErrorFile11());
FAIL() << "TestFuncResponseSeedPredation error processing didn't catch error for WriteFunResponseSeedPredationXMLErrorFile11.";
}
catch (modelErr& err)
{
if (err.sFunction.compare("clFuncResponseSeedPredation::GetParameterFileData") != 0)
{
FAIL() << "TestFuncResponseSeedPredation error processing caught wrong error for WriteFunResponseSeedPredationXMLErrorFile11.";
}
;
}
delete p_oSimManager;
}
/////////////////////////////////////////////////////////////////////////////
// TestSeedPredationNormal()
/////////////////////////////////////////////////////////////////////////////
TEST(FuncResponseSeedPredation, TestSeedPredationNormal)
{
clSimManager * p_oSimManager = new clSimManager( 7, 1, "" );
try {
clGrid *p_oSeedsGrid;
float fNumExpectedSeeds = 46724931.74,
fNumActualSeeds;
p_oSimManager->ReadFile(WriteFunResponseSeedPredationXMLFile1());
p_oSimManager->RunSim(1);
p_oSeedsGrid = p_oSimManager->GetGridObject("Dispersed Seeds");
p_oSeedsGrid->GetValueOfCell(0, 0, p_oSeedsGrid->GetFloatDataCode("seeds_0"), &fNumActualSeeds);
EXPECT_LT(fabs(fNumExpectedSeeds - fNumActualSeeds), 100);
delete p_oSimManager;
} catch (modelErr &e) {
delete p_oSimManager;
FAIL() << "Testing failed in function: " << e.sFunction << " with message: " << e.sMoreInfo;
}
}
/////////////////////////////////////////////////////////////////////////////
// WriteFunResponseSeedPredationXMLFile1()
/////////////////////////////////////////////////////////////////////////////
const char* WriteFunResponseSeedPredationXMLFile1() {
using namespace std;
const char *cFileString = "TestFile1.xml";
//Open file to write to
fstream oOut;
oOut.open(cFileString, ios::out | ios::trunc);
oOut << "<?xml version=\"1.0\" encoding=\"UTF-8\" standalone=\"no\" ?>"
<< "<paramFile fileCode=\"06010101\">"
<< "<plot>"
<< "<timesteps>1</timesteps>"
<< "<yearsPerTimestep>1</yearsPerTimestep>"
<< "<randomSeed>1</randomSeed>"
<< "<plot_lenX>160.0</plot_lenX>"
<< "<plot_lenY>160.0</plot_lenY>"
<< "<plot_latitude>55.37</plot_latitude>"
<< "<plot_precip_mm_yr>1150.645781</plot_precip_mm_yr>"
<< "<plot_temp_C>12.88171785</plot_temp_C>"
<< "</plot>"
<< "<trees>"
<< "<tr_speciesList>"
<< "<tr_species speciesName=\"Species_1\"/>"
<< "</tr_speciesList>"
<< "<tr_seedDiam10Cm>0.1</tr_seedDiam10Cm>"
<< "<tr_minAdultDBH>"
<< "<tr_madVal species=\"Species_1\">10.0</tr_madVal>"
<< "</tr_minAdultDBH>"
<< "<tr_maxSeedlingHeight>"
<< "<tr_mshVal species=\"Species_1\">1.35</tr_mshVal>"
<< "</tr_maxSeedlingHeight>"
<< "</trees>"
<< "<allometry>"
<< "<tr_canopyHeight>"
<< "<tr_chVal species=\"Species_1\">39.48</tr_chVal>"
<< "</tr_canopyHeight>"
<< "<tr_stdAsympCrownRad>"
<< "<tr_sacrVal species=\"Species_1\">0.0549</tr_sacrVal>"
<< "</tr_stdAsympCrownRad>"
<< "<tr_stdCrownRadExp>"
<< "<tr_screVal species=\"Species_1\">1.0</tr_screVal>"
<< "</tr_stdCrownRadExp>"
<< "<tr_stdMaxCrownRad>"
<< "<tr_smcrVal species=\"Species_1\">10</tr_smcrVal>"
<< "</tr_stdMaxCrownRad>"
<< "<tr_stdMaxCrownRad>"
<< "<tr_smcrVal species=\"Species_1\">10</tr_smcrVal>"
<< "</tr_stdMaxCrownRad>"
<< "<tr_conversionDiam10ToDBH>"
<< "<tr_cdtdVal species=\"Species_1\">0.8008</tr_cdtdVal>"
<< "</tr_conversionDiam10ToDBH>"
<< "<tr_interceptDiam10ToDBH>"
<< "<tr_idtdVal species=\"Species_1\">0</tr_idtdVal>"
<< "</tr_interceptDiam10ToDBH>"
<< "<tr_stdAsympCrownHt>"
<< "<tr_sachVal species=\"Species_1\">0.389</tr_sachVal>"
<< "</tr_stdAsympCrownHt>"
<< "<tr_stdCrownHtExp>"
<< "<tr_scheVal species=\"Species_1\">1.0</tr_scheVal>"
<< "</tr_stdCrownHtExp>"
<< "<tr_slopeOfHeight-Diam10>"
<< "<tr_sohdVal species=\"Species_1\">0.03418</tr_sohdVal>"
<< "</tr_slopeOfHeight-Diam10>"
<< "<tr_slopeOfAsymHeight>"
<< "<tr_soahVal species=\"Species_1\">0.0299</tr_soahVal>"
<< "</tr_slopeOfAsymHeight>"
<< "<tr_whatSeedlingHeightDiam>"
<< "<tr_wsehdVal species=\"Species_1\">0</tr_wsehdVal>"
<< "</tr_whatSeedlingHeightDiam>"
<< "<tr_whatSaplingHeightDiam>"
<< "<tr_wsahdVal species=\"Species_1\">0</tr_wsahdVal>"
<< "</tr_whatSaplingHeightDiam>"
<< "<tr_whatAdultHeightDiam>"
<< "<tr_wahdVal species=\"Species_1\">0</tr_wahdVal>"
<< "</tr_whatAdultHeightDiam>"
<< "<tr_whatAdultCrownRadDiam>"
<< "<tr_wacrdVal species=\"Species_1\">0</tr_wacrdVal>"
<< "</tr_whatAdultCrownRadDiam>"
<< "<tr_whatAdultCrownHeightHeight>"
<< "<tr_wachhVal species=\"Species_1\">0</tr_wachhVal>"
<< "</tr_whatAdultCrownHeightHeight>"
<< "<tr_whatSaplingCrownRadDiam>"
<< "<tr_wscrdVal species=\"Species_1\">0</tr_wscrdVal>"
<< "</tr_whatSaplingCrownRadDiam>"
<< "<tr_whatSaplingCrownHeightHeight>"
<< "<tr_wschhVal species=\"Species_1\">0</tr_wschhVal>"
<< "</tr_whatSaplingCrownHeightHeight>"
<< "</allometry>"
<< "<grid gridName=\"Dispersed Seeds\">"
<< "<ma_floatCodes>"
<< "<ma_floatCode label=\"seeds_0\">0</ma_floatCode>"
<< "</ma_floatCodes>"
<< "<ma_intCodes>"
<< "<ma_intCode label=\"count\">0</ma_intCode>"
<< "</ma_intCodes>"
<< "<ma_boolCodes>"
<< "<ma_boolCode label=\"Is Gap\">0</ma_boolCode>"
<< "</ma_boolCodes>"
<< "<ma_lengthXCells>160</ma_lengthXCells>"
<< "<ma_lengthYCells>160</ma_lengthYCells>"
<< "<ma_v x=\"0\" y=\"0\">"
<< "<fl c=\"0\">51200000</fl>"
<< "</ma_v>";
oOut << "</grid>"
<< "<behaviorList>"
<< "<behavior>"
<< "<behaviorName>FunctionalResponseSeedPredation</behaviorName>"
<< "<version>1</version>"
<< "<listPosition>1</listPosition>"
<< "<applyTo species=\"Species_1\" type=\"Seed\"/>"
<< "</behavior>"
<< "</behaviorList>"
<< "<FunctionalResponseSeedPredation1>"
<< "<pr_funcRespPredatorInitialDensity>0.00046875</pr_funcRespPredatorInitialDensity>"
<< "<pr_funcRespMaxInstDeclineRate1>-0.050622442</pr_funcRespMaxInstDeclineRate1>"
<< "<pr_funcRespMaxInstDeclineRate2>-0.050622442</pr_funcRespMaxInstDeclineRate2>"
<< "<pr_funcRespDemographicEfficiency1>0.000154258</pr_funcRespDemographicEfficiency1>"
<< "<pr_funcRespDemographicEfficiency2>0.000154258</pr_funcRespDemographicEfficiency2>"
<< "<pr_funcRespDensityDependentCoefficient1>-0.000718667</pr_funcRespDensityDependentCoefficient1>"
<< "<pr_funcRespDensityDependentCoefficient2>-0.000718667</pr_funcRespDensityDependentCoefficient2>"
<< "<pr_funcRespMaxIntakeRate>"
<< "<pr_frmirVal species=\"Species_1\">1042.2</pr_frmirVal>"
<< "</pr_funcRespMaxIntakeRate>"
<< "<pr_funcRespForagingEfficiency>"
<< "<pr_frfeVal species=\"Species_1\">0.001389</pr_frfeVal>"
<< "</pr_funcRespForagingEfficiency>"
<< "<pr_funcRespNumWeeksSeedFall>12</pr_funcRespNumWeeksSeedFall>"
<< "<pr_funcRespWeekSeason2Starts>52</pr_funcRespWeekSeason2Starts>"
<< "<pr_funcRespNumWeeksToModel>52</pr_funcRespNumWeeksToModel>"
<< "<pr_funcRespWeekGerminationStarts>32</pr_funcRespWeekGerminationStarts>"
<< "<pr_funcRespPreservePredatorDensities>0</pr_funcRespPreservePredatorDensities>"
<< "<pr_funcRespProportionGerminating>0.35</pr_funcRespProportionGerminating>"
<< "<pr_funcRespOutputFilename>TestSeeds.txt</pr_funcRespOutputFilename>"
<< "</FunctionalResponseSeedPredation1>"
<< "</paramFile>";
oOut.close();
return cFileString;
}
/////////////////////////////////////////////////////////////////////////////
// WriteFunResponseSeedPredationXMLFile2()
/////////////////////////////////////////////////////////////////////////////
const char* WriteFunResponseSeedPredationXMLFile2()
{
using namespace std;
const char *cFileString = "TestFile1.xml";
//Open file to write to
fstream oOut;
oOut.open(cFileString, ios::out | ios::trunc);
oOut << "<?xml version=\"1.0\" encoding=\"UTF-8\" standalone=\"no\" ?>" << "<paramFile fileCode=\"06010101\">" << "<plot>"
<< "<timesteps>1</timesteps>"
<< "<yearsPerTimestep>1</yearsPerTimestep>"
<< "<randomSeed>1</randomSeed>"
<< "<plot_lenX>160.0</plot_lenX>"
<< "<plot_lenY>160.0</plot_lenY>"
<< "<plot_latitude>55.37</plot_latitude>"
<< "<plot_precip_mm_yr>1150.645781</plot_precip_mm_yr>"
<< "<plot_temp_C>12.88171785</plot_temp_C>"
<< "</plot>"
<< "<trees>"
<< "<tr_speciesList>"
<< "<tr_species speciesName=\"Species_1\"/>"
<< "</tr_speciesList>"
<< "<tr_seedDiam10Cm>0.1</tr_seedDiam10Cm>"
<< "<tr_minAdultDBH>"
<< "<tr_madVal species=\"Species_1\">10.0</tr_madVal>"
<< "</tr_minAdultDBH>"
<< "<tr_maxSeedlingHeight>"
<< "<tr_mshVal species=\"Species_1\">1.35</tr_mshVal>"
<< "</tr_maxSeedlingHeight>"
<< "</trees>"
<< "<allometry>"
<< "<tr_canopyHeight>"
<< "<tr_chVal species=\"Species_1\">39.48</tr_chVal>"
<< "</tr_canopyHeight>"
<< "<tr_stdAsympCrownRad>"
<< "<tr_sacrVal species=\"Species_1\">0.0549</tr_sacrVal>"
<< "</tr_stdAsympCrownRad>"
<< "<tr_stdCrownRadExp>"
<< "<tr_screVal species=\"Species_1\">1.0</tr_screVal>"
<< "</tr_stdCrownRadExp>"
<< "<tr_stdMaxCrownRad>"
<< "<tr_smcrVal species=\"Species_1\">10</tr_smcrVal>"
<< "</tr_stdMaxCrownRad>"
<< "<tr_stdMaxCrownRad>"
<< "<tr_smcrVal species=\"Species_1\">10</tr_smcrVal>"
<< "</tr_stdMaxCrownRad>"
<< "<tr_conversionDiam10ToDBH>"
<< "<tr_cdtdVal species=\"Species_1\">0.8008</tr_cdtdVal>"
<< "</tr_conversionDiam10ToDBH>"
<< "<tr_interceptDiam10ToDBH>"
<< "<tr_idtdVal species=\"Species_1\">0</tr_idtdVal>"
<< "</tr_interceptDiam10ToDBH>"
<< "<tr_stdAsympCrownHt>"
<< "<tr_sachVal species=\"Species_1\">0.389</tr_sachVal>"
<< "</tr_stdAsympCrownHt>"
<< "<tr_stdCrownHtExp>"
<< "<tr_scheVal species=\"Species_1\">1.0</tr_scheVal>"
<< "</tr_stdCrownHtExp>"
<< "<tr_slopeOfHeight-Diam10>"
<< "<tr_sohdVal species=\"Species_1\">0.03418</tr_sohdVal>"
<< "</tr_slopeOfHeight-Diam10>"
<< "<tr_slopeOfAsymHeight>"
<< "<tr_soahVal species=\"Species_1\">0.0299</tr_soahVal>"
<< "</tr_slopeOfAsymHeight>"
<< "<tr_whatSeedlingHeightDiam>"
<< "<tr_wsehdVal species=\"Species_1\">0</tr_wsehdVal>"
<< "</tr_whatSeedlingHeightDiam>"
<< "<tr_whatSaplingHeightDiam>"
<< "<tr_wsahdVal species=\"Species_1\">0</tr_wsahdVal>"
<< "</tr_whatSaplingHeightDiam>"
<< "<tr_whatAdultHeightDiam>"
<< "<tr_wahdVal species=\"Species_1\">0</tr_wahdVal>"
<< "</tr_whatAdultHeightDiam>"
<< "<tr_whatAdultCrownRadDiam>"
<< "<tr_wacrdVal species=\"Species_1\">0</tr_wacrdVal>"
<< "</tr_whatAdultCrownRadDiam>"
<< "<tr_whatAdultCrownHeightHeight>"
<< "<tr_wachhVal species=\"Species_1\">0</tr_wachhVal>"
<< "</tr_whatAdultCrownHeightHeight>"
<< "<tr_whatSaplingCrownRadDiam>"
<< "<tr_wscrdVal species=\"Species_1\">0</tr_wscrdVal>"
<< "</tr_whatSaplingCrownRadDiam>"
<< "<tr_whatSaplingCrownHeightHeight>"
<< "<tr_wschhVal species=\"Species_1\">0</tr_wschhVal>"
<< "</tr_whatSaplingCrownHeightHeight>"
<< "</allometry>"
<< "<behaviorList>"
<< "<behavior>"
<< "<behaviorName>NonSpatialDisperse</behaviorName>"
<< "<version>1</version>"
<< "<listPosition>1</listPosition>"
<< "<applyTo species=\"Species_1\" type=\"Adult\"/>"
<< "</behavior>"
<< "<behavior>"
<< "<behaviorName>FunctionalResponseSeedPredation</behaviorName>"
<< "<version>1</version>"
<< "<listPosition>2</listPosition>"
<< "<applyTo species=\"Species_1\" type=\"Seed\"/>"
<< "</behavior>"
<< "</behaviorList>"
<< "<NonSpatialDisperse1>"
<< "<di_minDbhForReproduction>"
<< "<di_mdfrVal species=\"Species_1\">15.0</di_mdfrVal>"
<< "</di_minDbhForReproduction>"
<< "<di_nonSpatialSlopeOfLambda>"
<< "<di_nssolVal species=\"Species_1\">0</di_nssolVal>"
<< "</di_nonSpatialSlopeOfLambda>"
<< "<di_nonSpatialInterceptOfLambda>"
<< "<di_nsiolVal species=\"Species_1\">0.3</di_nsiolVal>"
<< "</di_nonSpatialInterceptOfLambda>"
<< "</NonSpatialDisperse1>"
<< "<GeneralDisperse>"
<< "<di_seedDistributionMethod>0</di_seedDistributionMethod>"
<< "</GeneralDisperse>"
<< "<FunctionalResponseSeedPredation2>"
<< "<pr_funcRespPredatorInitialDensity>0.46875</pr_funcRespPredatorInitialDensity>"
<< "<pr_funcRespMaxInstDeclineRate1>-0.050622442</pr_funcRespMaxInstDeclineRate1>"
<< "<pr_funcRespMaxInstDeclineRate2>-0.050622442</pr_funcRespMaxInstDeclineRate2>"
<< "<pr_funcRespDemographicEfficiency1>0.000154258</pr_funcRespDemographicEfficiency1>"
<< "<pr_funcRespDemographicEfficiency2>0.000154258</pr_funcRespDemographicEfficiency2>"
<< "<pr_funcRespDensityDependentCoefficient1>-0.000718667</pr_funcRespDensityDependentCoefficient1>"
<< "<pr_funcRespDensityDependentCoefficient2>-0.000718667</pr_funcRespDensityDependentCoefficient2>"
<< "<pr_funcRespMaxIntakeRate>"
<< "<pr_frmirVal species=\"Species_1\">7295.4</pr_frmirVal>"
<< "</pr_funcRespMaxIntakeRate>"
<< "<pr_funcRespForagingEfficiency>"
<< "<pr_frfeVal species=\"Species_1\">0.001389</pr_frfeVal>"
<< "</pr_funcRespForagingEfficiency>"
<< "<pr_funcRespWeekSeason2Starts>1</pr_funcRespWeekSeason2Starts>"
<< "<pr_funcRespNumWeeksSeedFall>12</pr_funcRespNumWeeksSeedFall>"
<< "<pr_funcRespNumWeeksToModel>52</pr_funcRespNumWeeksToModel>"
<< "<pr_funcRespWeekGerminationStarts>32</pr_funcRespWeekGerminationStarts>"
<< "<pr_funcRespPreservePredatorDensities>1</pr_funcRespPreservePredatorDensities>"
<< "<pr_funcRespProportionGerminating>0.35</pr_funcRespProportionGerminating>"
<< "</FunctionalResponseSeedPredation2>"
<< "</paramFile>";
oOut.close();
return cFileString;
}
/////////////////////////////////////////////////////////////////////////////
// WriteFunResponseSeedPredationXMLFile3()
/////////////////////////////////////////////////////////////////////////////
const char* WriteFunResponseSeedPredationXMLFile3()
{
using namespace std;
const char *cFileString = "TestFile1.xml";
//Open file to write to
fstream oOut;
oOut.open(cFileString, ios::out | ios::trunc);
oOut << "<?xml version=\"1.0\" encoding=\"UTF-8\" standalone=\"no\" ?>"
<< "<paramFile fileCode=\"06010101\">"
<< "<plot>"
<< "<timesteps>1</timesteps>"
<< "<yearsPerTimestep>1</yearsPerTimestep>"
<< "<randomSeed>1</randomSeed>"
<< "<plot_lenX>160.0</plot_lenX>"
<< "<plot_lenY>160.0</plot_lenY>"
<< "<plot_latitude>55.37</plot_latitude>"
<< "<plot_precip_mm_yr>1150.645781</plot_precip_mm_yr>"
<< "<plot_temp_C>12.88171785</plot_temp_C>"
<< "</plot>"
<< "<trees>"
<< "<tr_speciesList>"
<< "<tr_species speciesName=\"Species_1\"/>"
<< "</tr_speciesList>"
<< "<tr_seedDiam10Cm>0.1</tr_seedDiam10Cm>"
<< "<tr_minAdultDBH>"
<< "<tr_madVal species=\"Species_1\">10.0</tr_madVal>"
<< "</tr_minAdultDBH>"
<< "<tr_maxSeedlingHeight>"
<< "<tr_mshVal species=\"Species_1\">1.35</tr_mshVal>"
<< "</tr_maxSeedlingHeight>"
<< "</trees>"
<< "<allometry>"
<< "<tr_canopyHeight>"
<< "<tr_chVal species=\"Species_1\">39.48</tr_chVal>"
<< "</tr_canopyHeight>"
<< "<tr_stdAsympCrownRad>"
<< "<tr_sacrVal species=\"Species_1\">0.0549</tr_sacrVal>"
<< "</tr_stdAsympCrownRad>"
<< "<tr_stdCrownRadExp>"
<< "<tr_screVal species=\"Species_1\">1.0</tr_screVal>"
<< "</tr_stdCrownRadExp>"
<< "<tr_stdMaxCrownRad>"
<< "<tr_smcrVal species=\"Species_1\">10</tr_smcrVal>"
<< "</tr_stdMaxCrownRad>"
<< "<tr_stdMaxCrownRad>"
<< "<tr_smcrVal species=\"Species_1\">10</tr_smcrVal>"
<< "</tr_stdMaxCrownRad>"
<< "<tr_conversionDiam10ToDBH>"
<< "<tr_cdtdVal species=\"Species_1\">0.8008</tr_cdtdVal>"
<< "</tr_conversionDiam10ToDBH>"
<< "<tr_interceptDiam10ToDBH>"
<< "<tr_idtdVal species=\"Species_1\">0</tr_idtdVal>"
<< "</tr_interceptDiam10ToDBH>"
<< "<tr_stdAsympCrownHt>"
<< "<tr_sachVal species=\"Species_1\">0.389</tr_sachVal>"
<< "</tr_stdAsympCrownHt>"
<< "<tr_stdCrownHtExp>"
<< "<tr_scheVal species=\"Species_1\">1.0</tr_scheVal>"
<< "</tr_stdCrownHtExp>"
<< "<tr_slopeOfHeight-Diam10>"
<< "<tr_sohdVal species=\"Species_1\">0.03418</tr_sohdVal>"
<< "</tr_slopeOfHeight-Diam10>"
<< "<tr_slopeOfAsymHeight>"
<< "<tr_soahVal species=\"Species_1\">0.0299</tr_soahVal>"
<< "</tr_slopeOfAsymHeight>"
<< "<tr_whatSeedlingHeightDiam>"
<< "<tr_wsehdVal species=\"Species_1\">0</tr_wsehdVal>"
<< "</tr_whatSeedlingHeightDiam>"
<< "<tr_whatSaplingHeightDiam>"
<< "<tr_wsahdVal species=\"Species_1\">0</tr_wsahdVal>"
<< "</tr_whatSaplingHeightDiam>"
<< "<tr_whatAdultHeightDiam>"
<< "<tr_wahdVal species=\"Species_1\">0</tr_wahdVal>"
<< "</tr_whatAdultHeightDiam>"
<< "<tr_whatAdultCrownRadDiam>"
<< "<tr_wacrdVal species=\"Species_1\">0</tr_wacrdVal>"
<< "</tr_whatAdultCrownRadDiam>"
<< "<tr_whatAdultCrownHeightHeight>"
<< "<tr_wachhVal species=\"Species_1\">0</tr_wachhVal>"
<< "</tr_whatAdultCrownHeightHeight>"
<< "<tr_whatSaplingCrownRadDiam>"
<< "<tr_wscrdVal species=\"Species_1\">0</tr_wscrdVal>"
<< "</tr_whatSaplingCrownRadDiam>"
<< "<tr_whatSaplingCrownHeightHeight>"
<< "<tr_wschhVal species=\"Species_1\">0</tr_wschhVal>"
<< "</tr_whatSaplingCrownHeightHeight>"
<< "</allometry>"
<< "<behaviorList>"
<< "<behavior>"
<< "<behaviorName>NonSpatialDisperse</behaviorName>"
<< "<version>1</version>"
<< "<listPosition>1</listPosition>"
<< "<applyTo species=\"Species_1\" type=\"Adult\"/>"
<< "</behavior>"
<< "<behavior>"
<< "<behaviorName>FunctionalResponseSeedPredation</behaviorName>"
<< "<version>1</version>"
<< "<listPosition>2</listPosition>"
<< "<applyTo species=\"Species_1\" type=\"Seed\"/>"
<< "</behavior>"
<< "</behaviorList>"
<< "<NonSpatialDisperse1>"
<< "<di_minDbhForReproduction>"
<< "<di_mdfrVal species=\"Species_1\">15.0</di_mdfrVal>"
<< "</di_minDbhForReproduction>"
<< "<di_nonSpatialSlopeOfLambda>"
<< "<di_nssolVal species=\"Species_1\">0</di_nssolVal>"
<< "</di_nonSpatialSlopeOfLambda>"
<< "<di_nonSpatialInterceptOfLambda>"
<< "<di_nsiolVal species=\"Species_1\">0.3</di_nsiolVal>"
<< "</di_nonSpatialInterceptOfLambda>"
<< "</NonSpatialDisperse1>"
<< "<GeneralDisperse>"
<< "<di_seedDistributionMethod>0</di_seedDistributionMethod>"
<< "</GeneralDisperse>"
<< "<FunctionalResponseSeedPredation2>"
<< "<pr_funcRespPredatorInitialDensity>0.00046875</pr_funcRespPredatorInitialDensity>"
<< "<pr_funcRespMaxInstDeclineRate1>-0.050622442</pr_funcRespMaxInstDeclineRate1>"
<< "<pr_funcRespMaxInstDeclineRate2>-0.050622442</pr_funcRespMaxInstDeclineRate2>"
<< "<pr_funcRespDemographicEfficiency1>0.000154258</pr_funcRespDemographicEfficiency1>"
<< "<pr_funcRespDemographicEfficiency2>0.000154258</pr_funcRespDemographicEfficiency2>"
<< "<pr_funcRespDensityDependentCoefficient1>-0.000718667</pr_funcRespDensityDependentCoefficient1>"
<< "<pr_funcRespDensityDependentCoefficient2>-0.000718667</pr_funcRespDensityDependentCoefficient2>"
<< "<pr_funcRespMaxIntakeRate>"
<< "<pr_frmirVal species=\"Species_1\">7295.4</pr_frmirVal>"
<< "</pr_funcRespMaxIntakeRate>"
<< "<pr_funcRespForagingEfficiency>"
<< "<pr_frfeVal species=\"Species_1\">0.001389</pr_frfeVal>"