Issues

• API to compute the count for every lineage including sub-lineages

  GenSpectrum/LAPIS#1876 · Filter by author chaoran-chen opened on Sep 14, 2026
  1

• Pull reference genome directly from RhyDB

  GenSpectrum/LAPIS#1874 · Filter by author fhennig opened on Sep 14, 2026

• Consider properly weighing cache entries

  GenSpectrum/LAPIS#1852 · Filter by author fhennig opened on Sep 3, 2026

• Reduce mutations-over-time query fan-out using unionAll

  GenSpectrum/LAPIS#1835 · Filter by author fhennig opened on Aug 28, 2026
  1

• dataFormat and compression work as query parameters for POST but are not declared in OpenAPI

  GenSpectrum/LAPIS#1834 · Filter by author corneliusroemer opened on Aug 27, 2026

• Rename SILO to RhyDB: code

  GenSpectrum/LAPIS#1818 · Filter by author fengelniederhammer opened on Aug 17, 2026
  

• Rename SILO to RhyDB

  epic
  GenSpectrum/LAPIS#1801 · Filter by author fengelniederhammer opened on Aug 3, 2026
  

• /sample/phyloSubtree does not pass on printNodesNotInTree argument

  bug
  GenSpectrum/LAPIS#1689 · Filter by author fengelniederhammer opened on May 18, 2026

• User friendly errors in advanced query parsing

  GenSpectrum/LAPIS#1671 · Filter by author fengelniederhammer opened on Apr 30, 2026
  2

• Arrow data format performance analysis

  GenSpectrum/LAPIS#1669 · Filter by author fengelniederhammer opened on Apr 28, 2026

• Allow pre-selecting mutations when calling nucleotideMutations

  enhancement
  GenSpectrum/LAPIS#1656 · Filter by author fhennig opened on Apr 21, 2026

• Check NDJSON support for SwaggerUI

  GenSpectrum/LAPIS#1655 · Filter by author fengelniederhammer opened on Apr 21, 2026
  2

• Improve OpenAPI spec of filter in query/parse response

  GenSpectrum/LAPIS#1545 · Filter by author fhennig opened on Feb 18, 2026

• Investigate how to connect LAPIS auth with a GitHub OAuth app

  GenSpectrum/LAPIS#1537 · Filter by author fengelniederhammer opened on Feb 12, 2026
  1

• Improve 'bad request' error message.

  GenSpectrum/LAPIS#1536 · Filter by author fhennig opened on Feb 12, 2026

• JavaScript library for advanced queries

  epic
  GenSpectrum/LAPIS#1466 · Filter by author chaoran-chen opened on Dec 4, 2025

• API feature: Subtype/segment query overrides

  GenSpectrum/LAPIS#1459 · Filter by author anna-parker opened on Dec 1, 2025
  1

• refactor: Move cleaning/validation functions from SiloQueryModel further up the call stack, into the controllers.

  GenSpectrum/LAPIS#1452 · Filter by author fhennig opened on Nov 26, 2025

• Simplify controller tests

  question
  GenSpectrum/LAPIS#1363 · Filter by author fengelniederhammer opened on Sep 17, 2025
  3

• Docs: update to React 19

  GenSpectrum/LAPIS#1329 · Filter by author fengelniederhammer opened on Aug 19, 2025
  2

• Reporting errors in ndjson streams

  GenSpectrum/LAPIS#1323 · Filter by author pflanze opened on Aug 18, 2025
  3

• Document Operator architecture a bit better

  GenSpectrum/LAPIS#1319 · Filter by author fhennig opened on Aug 14, 2025

• Improve error message when specifying unknown data format

  GenSpectrum/LAPIS#1312 · Filter by author chaoran-chen opened on Aug 10, 2025

• Default order by in aggregated (when a limit is set)

  GenSpectrum/LAPIS#1307 · Filter by author chaoran-chen opened on Aug 7, 2025

• Investigate if TSV and CSV export option is used for mostRecentCommonAncestor endpoint and potentially remove

  GenSpectrum/LAPIS#1286 · Filter by author anna-parker opened on Jul 28, 2025
  2