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[MC/PWGEM] remove unnecessary files (#2484) #8746

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Run time

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Job	Run time
Bash	8s
Pylint	37s
Test-harness unit tests	5s
File-IO-graph unit tests	6s
JSON	7s
Shellcheck	16s
Workflow-runner unit tests	12s
Config-check	7s
	1m 38s